Consensus                         CAACTTTWDBMDWKYWVAMSHVDRMDHNBVMRWWHDWKHKMDBTSRHDRKVRYTBRVDYD   60
SRR29245461.11839598/2            .......AACCATTCAA.CCAGAAATCGGACGATTAATTGCAC.GGTAATCAT.TGATTA   60
SRR29245461.8438634/2             --.....AACCATTCAA.CCAGAAATCGGACGATTAATTGCAC.GGTAATCAT.TGATTA   58
SRR29245461.24357035/1            -----..AACCATTCAA.CCAGAAATCGGACGATTAATTGCAC.GGTAATCAT.TGATTA   55
SRR29245461.13385940/1 (reversed) ------.TTTCAAGCAG.AGACGGCATACGAGATATTTCGAGG.GACTGGAGT.CAGACG   54
SRR29245461.5781394/1 (reversed)  -------TGGAGTTCAG.CGTGTGCTCTTCCGATCTATTGCAC.GGTAATCAT.TGATTA   53
SRR29245461.3595363/1 (reversed)  ----------CTTTTTC.AGCAGAAGACGGCATACGAGATATT.CGAGGTGAC.GGAGTT   50
SRR29245461.24357035/2 (reversed) --------------------AGAAATCGGACGATTAATTGCAC.GGTAATCAT.TGATTA   40
SRR29245461.16930095/1 (reversed) -----------------------AATCGGACGATTAATTGCAC.GGTAATCAT.TGATTA   37
SRR29245461.5672169/1             ------------------------ATCGGACGATTAATTGCAC.GGTAATCAT.TGATTA   36
SRR29245461.3919998/1 (reversed)  ----------------------------GACGATTAATTGCAC.GGTAATCAT.TGATTA   32
SRR29245461.13946394/1            --------------------------------------TGCAC.GGTAATCAT.TGATTA   22
SRR29245461.9420332/2             ---------------------------------------------------AT.TGATTA    9
SRR29245461.9420306/2             ---------------------------------------------------AT.TGCTTA    9
SRR29245461.29216110/2 (reversed) ------------------------------------------------------------
SRR29245461.20679548/2            ------------------------------------------------------------
SRR29245461.20679544/2            ------------------------------------------------------------
SRR29245461.15331595/1            ------------------------------------------------------------
SRR29245461.29216110/1            ------------------------------------------------------------
SRR29245461.24976348/1            ------------------------------------------------------------
SRR29245461.7440516/1 (reversed)  ------------------------------------------------------------
SRR29245461.7440516/2             ------------------------------------------------------------
SRR29245461.19350108/1            ------------------------------------------------------------
SRR29245461.18520747/2            ------------------------------------------------------------
SRR29245461.19350108/2 (reversed) ------------------------------------------------------------
SRR29245461.15331595/2 (reversed) ------------------------------------------------------------
SRR29245461.13946394/2 (reversed) ------------------------------------------------------------
SRR29245461.24976348/2 (reversed) ------------------------------------------------------------
SRR29245461.5787228/1             ------------------------------------------------------------
SRR29245461.5234354/1 (reversed)  ------------------------------------------------------------
SRR29245461.9420332/1 (reversed)  ------------------------------------------------------------
SRR29245461.9420306/1 (reversed)  ------------------------------------------------------------
SRR29245461.5234354/2             ------------------------------------------------------------

Consensus                         BVDVMDHDWVVBHHYBSVDWYHWGCWMMRAWYYTYAAAATMGGSGATMAGATMYDATCVC  120
SRR29245461.11839598/2            GAACAGAAAAAGCATGGATACAA..AAAA.ATC.C.....C..C...C....CCT...C.  120
SRR29245461.8438634/2             GAACAGAAAAAGCATGGATACAA..AAAA.ATC.C.....C..C...C....CTT...C.  118
SRR29245461.24357035/1            GAACAGAAAAAGCATGGATACAA..AAAA.ATC.C.....C..C...C....ACT...A.  115
SRR29245461.13385940/1 (reversed) TGTGCTCTTCCGATCTGATACAA..AAAA.ATC.C.....C..C...C....CCT...C.  114
SRR29245461.5781394/1 (reversed)  GAACAGAAAAAGCATGGATACAA..AAAA.ATC.C.....C..C...C....CCT...C.  113
SRR29245461.3595363/1 (reversed)  CAGACGTGTGCTCTTCCGATCTA..AAAA.ATC.C.....C..C...C....CCT...C.  110
SRR29245461.24357035/2 (reversed) GAACAGAAAAAGCATGGATACAA..AAAA.ATC.C.....C..C...C....ACT...A.  100
SRR29245461.16930095/1 (reversed) GAACAGAAAAAGCATGGATACAA..AAAA.ATC.C.....C..C...C....CTT...C.   97
SRR29245461.5672169/1             GAACAGAAAAAGCATGGATACAA..AAAA.ATC.C.....C..C...C....CCT...C.   96
SRR29245461.3919998/1 (reversed)  GAACAGAAAAAGCATGGATACAA..AAAA.ATC.C.....C..C...C....ACT...A.   92
SRR29245461.13946394/1            GAACAGAAAAAGCATGGATACAA..AAAA.ATC.C.....C..C...C....CCT...C.   82
SRR29245461.9420332/2             GAACAGAAAAATCATGGATACAA..AAAA.ATC.T.....C..C...C....CCT...C.   69
SRR29245461.9420306/2             GAACAGAAAAATCATGGATACAA..AAAA.ATC.T.....C..C...C....CCA...C.   69
SRR29245461.29216110/2 (reversed) CCTACACGACGCTCTTCCGATCT..AAAA.ATC.C.....C..C...C....CCT...C.   60
SRR29245461.20679548/2            ------------CATGGATACAA..AAAA.ATC.C.....C..C...C....CTT...C.   48
SRR29245461.20679544/2            ------------CATGGATACAA..AAAA.ATC.C.....C..C...C....CTT...C.   48
SRR29245461.15331595/1            --------------------CAA..AAAA.ATC.C.....C..C...C....CTT...C.   40
SRR29245461.29216110/1            -----------------------..AAAA.ATC.C.....C..C...C....CCT...C.   37
SRR29245461.24976348/1            -----------------------..AAAA.ATC.C.....C..C...C....CCT...C.   37
SRR29245461.7440516/1 (reversed)  -------------------------TCCG.TCT.C.....C..C...C....CTT...C.   35
SRR29245461.7440516/2             ---------------------------------.C.....C..C...C....CTT...C.   27
SRR29245461.19350108/1            ----------------------------------------A..G...A....CTG...G.   20
SRR29245461.18520747/2            ----------------------------------------C..C...C....CCT...C.   20
SRR29245461.19350108/2 (reversed) ---------------------------------------------------------.G.    3
SRR29245461.15331595/2 (reversed) ----------------------------------------------------------C.    2
SRR29245461.13946394/2 (reversed) -----------------------------------------------------------.    1
SRR29245461.24976348/2 (reversed) ------------------------------------------------------------
SRR29245461.5787228/1             ------------------------------------------------------------
SRR29245461.5234354/1 (reversed)  ------------------------------------------------------------
SRR29245461.9420332/1 (reversed)  ------------------------------------------------------------
SRR29245461.9420306/1 (reversed)  ------------------------------------------------------------
SRR29245461.5234354/2             ------------------------------------------------------------

Consensus                         CTGTSAATGTGDCTGCGGNGCAVHWCVBVHSHDNVWMDSRWMDRRWYBSMNVWMWSGCTB  180
SRR29245461.11839598/2            ....G......G......-...ACT.ATCTCT----------------------------  179
SRR29245461.8438634/2             ....G......G......T...ATA.AGGAGAT---------------------------  178
SRR29245461.24357035/1            ....G......A......-...ACT.ATCTCTAAGTA-----------------------  174
SRR29245461.13385940/1 (reversed) ....G......G......T...ATA.AGGCCCA-ATAG----------------------  173
SRR29245461.5781394/1 (reversed)  ....G......G......-...ACT.ATCTCTAAGTATG---------------------  172
SRR29245461.3595363/1 (reversed)  ....G......G......T...ATA.AGGCCCA-ATAGCATA------------------  169
SRR29245461.24357035/2 (reversed) ....G......A......-...ACT.ATCTCTAAGTATGGAAGGGATGGACA--------  159
SRR29245461.16930095/1 (reversed) ....G......G......T...ATA.AGGCCTA-GTATCATAAAATCCCCTCAAT-----  156
SRR29245461.5672169/1             ....G......G......T...GAT.GGAAGAG-CACACGTCTGAACTCCAGTCAC----  155
SRR29245461.3919998/1 (reversed)  ....G......G......T...ATA.ACGCCTA-GTATCATAAAATCCCCTCAATG...T  151
SRR29245461.13946394/1            ....G......G......T...ATA.AGGCCCA-ATAGCATAAAATCCCCTCAATG...T  141
SRR29245461.9420332/2             ....C......G......T...ATA.AGGCCTA-ATAGCATAAAATCCCCTCAATG...G  128
SRR29245461.9420306/2             ....C......T......T...ATA.AGGCCTA-ATAGCATAAAATCCCCTCAAAG...C  128
SRR29245461.29216110/2 (reversed) ....G......G......T...ATA.AGGCCCA-ATAGCATAAAATCCCCTCAATG...T  119
SRR29245461.20679548/2            ....G......G......T...ATA.AGGCCTA-GTATCATAAAATCCCCTCAATG...G  107
SRR29245461.20679544/2            ....G......G......T...ATA.AGGCCTA-GTATCATAAAATCCCCTCAATG...G  107
SRR29245461.15331595/1            ....G......G......T...ATA.AGGCCTA-GTATCATAAAATCCCCTCAATG...G   99
SRR29245461.29216110/1            ....G......G......T...ATA.AGGCCCA-ATAGCATAAAATCCCCTCAATG...T   96
SRR29245461.24976348/1            ....G......G......T...ATA.AGGCCCA-ATAGCATAAAATCCCCTCAATG...T   96
SRR29245461.7440516/1 (reversed)  ....G......G......T...ATA.AGGCCTA-GTATCATAAAATCCCCTCAATG...G   94
SRR29245461.7440516/2             ....G......G......T...ATA.AGGCCTA-GTATCATAAAATCCCCTCAATG...G   86
SRR29245461.19350108/1            ....G......G......T...ATA.AGGCCTA-GTATCATAAAATCCCCTCAATG...G   79
SRR29245461.18520747/2            ....C......G......T...ATA.AGGCCTA-ATAGCATAAAATCCCCGCAATG...G   79
SRR29245461.19350108/2 (reversed) ....G......G......T...ATA.AGGCCTA-GTATCATAAAATCCCCTCAATG...G   62
SRR29245461.15331595/2 (reversed) ....G......G......T...ATA.AGGCCTA-GTATCATAAAATCCCCTCAATG...G   61
SRR29245461.13946394/2 (reversed) ....G......G......T...ATA.AGGCCCA-ATAGCATAAAATCCCCTCAATG...T   60
SRR29245461.24976348/2 (reversed) ---.G......G......T...ATA.AGGCCCA-ATAGCATAAAATCCCCTCAATG...T   56
SRR29245461.5787228/1             --------------....T...ATA.ACGCCTA-GTATCATAAAATCCCCTCAATG...T   45
SRR29245461.5234354/1 (reversed)  ----------------------CTT.CGATCTA-ATAGCATAAAATCCCCTCAATG...T   37
SRR29245461.9420332/1 (reversed)  ---------------------------GGCCTA-ATAGCATAAAATCCCCTCAATG...G   32
SRR29245461.9420306/1 (reversed)  ---------------------------GGCCTA-ATAGCATAAAATCCCCTCAATG...G   32
SRR29245461.5234354/2             --------------------------------A-ATAGCATAAAATCCCCTCAATG...T   27

Consensus                         ACAAATWTCGAGGAAGTGAYMGGGATTCAAGAAGRTNGRMASAGMAMRCGTCTRWGACMK  240
SRR29245461.11839598/2            ------------------------------------------------------------  239
SRR29245461.8438634/2             ------------------------------------------------------------  238
SRR29245461.24357035/1            ------------------------------------------------------------  234
SRR29245461.13385940/1 (reversed) ------------------------------------------------------------  233
SRR29245461.5781394/1 (reversed)  ------------------------------------------------------------  232
SRR29245461.3595363/1 (reversed)  ------------------------------------------------------------  229
SRR29245461.24357035/2 (reversed) ------------------------------------------------------------  219
SRR29245461.16930095/1 (reversed) ------------------------------------------------------------  216
SRR29245461.5672169/1             ------------------------------------------------------------  215
SRR29245461.3919998/1 (reversed)  ------------------------------------------------------------  211
SRR29245461.13946394/1            ......T...--------------------------------------------------  201
SRR29245461.9420332/2             ......T............TA..-------------------------------------  188
SRR29245461.9420306/2             ......A............TC..-------------------------------------  188
SRR29245461.29216110/2 (reversed) ......T............TA...........----------------------------  179
SRR29245461.20679548/2            ......T............TA.............G.-.AC.C..A---------------  166
SRR29245461.20679544/2            ......T............TA.............G.-.AC.C..A---------------  166
SRR29245461.15331595/1            ......T............TA.............G.-.AC.C..A.AG.....-------  158
SRR29245461.29216110/1            ......T............TA.............A.C.GA.G..C.CA.....GA-----  156
SRR29245461.24976348/1            ......T............TA.............G.-.AC.C..A.AG.....AT.----  155
SRR29245461.7440516/1 (reversed)  ......T............TA.............G.-.AC.C..A.AG.....AT...--  153
SRR29245461.7440516/2             ......T............TA.............G.-.AC.C..A.AG.....AT...AG  145
SRR29245461.19350108/1            ......T............TA.............G.-.AC.C..A.AG.....AT...CT  138
SRR29245461.18520747/2            ......T............TA.............G.-.AC.C..A.AG.....AT...CT  138
SRR29245461.19350108/2 (reversed) ......T............TA.............G.-.AC.C..A.AG.....AT...CT  121
SRR29245461.15331595/2 (reversed) ......T............TA.............G.-.AC.C..A.AG.....AT...CT  120
SRR29245461.13946394/2 (reversed) ......T............TA.............G.-.AC.C..A.AG.....AT...CT  119
SRR29245461.24976348/2 (reversed) ......T............TA.............G.-.AC.C..A.AG.....AT...CT  115
SRR29245461.5787228/1             ......T............CA.............G.-.AC.C..A.AG.....AT...CT  104
SRR29245461.5234354/1 (reversed)  ......T............TA.............G.-.AC.C..A.AG.....AT...CT   96
SRR29245461.9420332/1 (reversed)  ......T............TA.............G.-.AC.C..A.AG.....AT...CT   91
SRR29245461.9420306/1 (reversed)  ......T............TA.............G.-.AC.C..A.AG.....AT...CT   91
SRR29245461.5234354/2             ......T............TA.............G.-.AC.C..A.AG.....AT...CT   86

Consensus                         AKMRGWGGAGGACAATCATAATTTTGTTGCCAATGGGTT-ATTAGTTCATAACTGCNAKA  299
SRR29245461.11839598/2            ------------------------------------------------------------  299
SRR29245461.8438634/2             ------------------------------------------------------------  298
SRR29245461.24357035/1            ------------------------------------------------------------  294
SRR29245461.13385940/1 (reversed) ------------------------------------------------------------  293
SRR29245461.5781394/1 (reversed)  ------------------------------------------------------------  292
SRR29245461.3595363/1 (reversed)  ------------------------------------------------------------  289
SRR29245461.24357035/2 (reversed) ------------------------------------------------------------  279
SRR29245461.16930095/1 (reversed) ------------------------------------------------------------  276
SRR29245461.5672169/1             ------------------------------------------------------------  275
SRR29245461.3919998/1 (reversed)  ------------------------------------------------------------  271
SRR29245461.13946394/1            ------------------------------------------------------------  261
SRR29245461.9420332/2             ------------------------------------------------------------  248
SRR29245461.9420306/2             ------------------------------------------------------------  248
SRR29245461.29216110/2 (reversed) ------------------------------------------------------------  239
SRR29245461.20679548/2            ------------------------------------------------------------  226
SRR29245461.20679544/2            ------------------------------------------------------------  226
SRR29245461.15331595/1            ------------------------------------------------------------  218
SRR29245461.29216110/1            ------------------------------------------------------------  216
SRR29245461.24976348/1            ------------------------------------------------------------  215
SRR29245461.7440516/1 (reversed)  ------------------------------------------------------------  213
SRR29245461.7440516/2             .TCG.A------------------------------------------------------  205
SRR29245461.19350108/1            .GAA.T.......-----------------------------------------------  198
SRR29245461.18520747/2            .GAA.T.......-----------------------------------------------  198
SRR29245461.19350108/2 (reversed) .GAA.T........................------------------------------  181
SRR29245461.15331595/2 (reversed) .GAA.T.........................-----------------------------  180
SRR29245461.13946394/2 (reversed) .GAA.T..........................----------------------------  179
SRR29245461.24976348/2 (reversed) .GAA.T..............................------------------------  175
SRR29245461.5787228/1             .GAA.T.................................-........------------  163
SRR29245461.5234354/1 (reversed)  .GAA.T.................................-................----  155
SRR29245461.9420332/1 (reversed)  .GAA.T.................................-................C.T.  150
SRR29245461.9420306/1 (reversed)  .GAA.T.................................-................C.T.  150
SRR29245461.5234354/2             .GAA.T.................................-................-.G.  144

Consensus                         TCGGAAG                                                       306
SRR29245461.11839598/2            -------                                                       151
SRR29245461.8438634/2             -------                                                       151
SRR29245461.24357035/1            -------                                                       151
SRR29245461.13385940/1 (reversed) -------                                                       151
SRR29245461.5781394/1 (reversed)  -------                                                       151
SRR29245461.3595363/1 (reversed)  -------                                                       151
SRR29245461.24357035/2 (reversed) -------                                                       151
SRR29245461.16930095/1 (reversed) -------                                                       151
SRR29245461.5672169/1             -------                                                       151
SRR29245461.3919998/1 (reversed)  -------                                                       151
SRR29245461.13946394/1            -------                                                       151
SRR29245461.9420332/2             -------                                                       151
SRR29245461.9420306/2             -------                                                       151
SRR29245461.29216110/2 (reversed) -------                                                       151
SRR29245461.20679548/2            -------                                                       151
SRR29245461.20679544/2            -------                                                       151
SRR29245461.15331595/1            -------                                                       151
SRR29245461.29216110/1            -------                                                       151
SRR29245461.24976348/1            -------                                                       151
SRR29245461.7440516/1 (reversed)  -------                                                       151
SRR29245461.7440516/2             -------                                                       151
SRR29245461.19350108/1            -------                                                       151
SRR29245461.18520747/2            -------                                                       151
SRR29245461.19350108/2 (reversed) -------                                                       151
SRR29245461.15331595/2 (reversed) -------                                                       151
SRR29245461.13946394/2 (reversed) -------                                                       151
SRR29245461.24976348/2 (reversed) -------                                                       151
SRR29245461.5787228/1             -------                                                       151
SRR29245461.5234354/1 (reversed)  -------                                                       151
SRR29245461.9420332/1 (reversed)  .------                                                       151
SRR29245461.9420306/1 (reversed)  .------                                                       151
SRR29245461.5234354/2             .......                                                       151

